01/3D Structure
? About the 3D Viewer
Mol* (pronounced "molstar") is an open-source molecular visualization tool used by the Protein Data Bank and AlphaFold Database. Learn more at molstar.org.
Controls:
- Rotate: Click and drag
- Zoom: Scroll wheel or pinch
- Pan: Right-click and drag (or two-finger drag)
- Reset: Double-click to reset view
What am I looking at?
This is a predicted 3D structure of the protein. The ribbon diagram shows the protein backbone—helices appear as coils, sheets as arrows, and loops as simple lines. The shape determines how the protein functions: where it binds to other molecules, how it catalyzes reactions, and how mutations might disrupt its activity.
Color legend:
The structure is colored by pLDDT confidence score, which indicates how confident AlphaFold is in each region's predicted position:
- Blue (>90): Very high confidence
- Cyan (70-90): Confident
- Yellow (50-70): Low confidence
- Orange (<50): Very low confidence, likely disordered
02/AI Analysis
TLDR
FUS P525L is a mutation in an RNA-binding protein that causes an aggressive, early-onset form of amyotrophic lateral sclerosis (ALS), a fatal disease where nerve cells controlling movement gradually die. The AlphaFold2 structure shows very low confidence (50.4 out of 100), indicating that this mutation causes severe structural instability in the protein. This instability aligns with experimental findings that P525L traps FUS in the wrong cellular compartment, where it forms toxic clumps that kill nerve cells.
Detailed Analysis
Works Cited
Similar Research
03/Research Data
ClinVar Classification
Review: criteria provided, multiple submitters
Last evaluated: 2026-01-01
Population Frequency
No population data available
Disease Associations
599 totalShowing 5 of 599 associations
AI Research Brief
04/AlphaFold Metrics
05/Domain Annotations
Structural Domains & Regions
Binding Partners
Gene Ontology
06/Structural Caption
FUS P525L variant showing predominantly disordered structure (23% high-confidence) with ordered RRM and RanBP2 domains; C-terminal mutation may alter phase separation dynamics.
Average pLDDT of 50.4 with only 23% high-confidence residues (119/526) indicates a predominantly disordered protein. The RRM domain (285-371) and RanBP2-type region (422-453) likely constitute the primary structured elements, while extensive N-terminal (1-286) and C-terminal (444-526) regions remain intrinsically disordered.
The RRM and RanBP2-type domains correspond to the minority high-confidence regions embedded within extensive intrinsically disordered segments enriched in glycine repeats, low-complexity sequences, and polar residues. This architecture is consistent with FUS's role as an RNA-binding protein with prion-like low-complexity domains.
The P525L mutation occurs in the C-terminal disordered region (511-526) containing basic and acidic residues, potentially disrupting the proline-mediated structural constraint and affecting liquid-liquid phase separation properties critical for FUS function and ALS pathogenesis.
07/Peptide Therapeutics
Aggregation Analysis
Aggregation propensity analysis identifies 1 hotspots (average score: -0.18) using Pawar+KyteDoolittle+charge algorithm.
08/Known Inhibitors
Known Binders from ChEMBL
09/Candidate Peptides
De Novo Peptide Design Pipeline
Pipeline: BoltzGen (de novo binder design) → Boltz-2 rescore → 8-gate wetlab filter → PK + BBB advisory gates. Target site selected from UniProt curated annotations, P2Rank pocket prediction, and aggregation propensity (in that priority order). Advisory gates annotate each candidate with estimated serum half-life, renal/immunogenicity risk, and (for CNS targets) a recommended blood-brain-barrier shuttle conjugation — without silently dropping designs.
Loading candidate statistics...
Sequences are withheld pending IP review. Full candidate data (sequences,
scores, CIF files) is available to authorized reviewers via the
/api/private/candidates/{fold_id} endpoint with
X-Private-Key.
Legacy candidates (charge-complementary)
Target Region
Residues 307–311 (0.54 aggregation score)Candidate ID
CP-FUS-001
(7 residues · computational design)
10/Agent Findings
Literature Agent (1)
These papers provide comprehensive insights into FUS P525L pathogenesis, clinical characteristics, and therapeutic approaches. They demonstrate how this mutation disrupts nuclear localization, causes cytoplasmic accumulation, affects RNA metabolism, and leads to aggressive juvenile ALS, while also showing promising therapeutic development with antisense oligonucleotides.
Clinical Agent (1)
The first baseline data collection for FUS P525L variant carriers represents the initial systematic documentation of clinical, cognitive, and biomarker measurements before disease onset or in early disease stages. This foundational dataset will enable researchers to establish normal ranges for this specific variant and track longitudinal changes that precede or accompany ALS/FTD symptom development. The baseline data is critical for identifying early biomarkers of disease progression and developing predictive models for symptom onset timing in presymptomatic carriers.
Structural Agent (1)
AlphaFold structure update: Baseline check: 2 structure(s) found
Supplements Agent (1)
The research landscape for FUS P525L shows limited direct supplement or peptide trials, with most clinical studies focused on natural history rather than therapeutic interventions. However, preclinical research suggests autophagy-inducing compounds and peptide modulators targeting FUS protein structure could represent promising therapeutic avenues.
Synthesis Agent (1)
Synthesis of 1 findings (peptides): Synthesis JSON could not be parsed; raw response is in agent logs....
Peptide Agent (1)
FUS P525L: 2 known binders (top: 17.5 nM); 1 candidate peptides designed